Supplementary Information for "The Emergence of Geometric Order in Proliferating Metazoan Epithelia"

نویسندگان

  • Matthew C. Gibson
  • Ankit B. Patel
  • Radhika Nagpal
چکیده

This supplementary document presents two extensions of the mathematical model, as well as a more detailed description of the Drosophila experimental data. In addition, we present some clarifications on the graph model and a detailed methods section. In the paper we approximate s t , the average number of sides per cell at generation t as: s t ≈ 2e t / f t = 2(e t-1 + 3f t-1) / 2f t-1 = (s t-1 / 2) + 3 (1) We solve this recurrence to get: s t ≈ 6 + 2-t (s 0 – 6) (2) However, this equation for s t is only an upper bound approximation because it double counts edges on the boundary of the epithelium. If we account for boundary cells, then the exact equation for s t is: s t = (2e t-e t bd) / f t = 6 + 2-t (s 0 – 6)-e t bd / f t (3) where e t bd is the number of boundary edges and f t is the number of cells at generation t. This basically is the same as equation (1) but corrects for the over counted edges. In a 2D epithelium comprised of similarly-sized cells, the number of boundary edges approximately measures the perimeter and the number of cells approximately measures area. Hence e t bd ~ O(r) and f t ~ O(r 2), where r is the radius of the epithelium (in cells). The third term in equation (3) is therefore O(1/r) and this approaches zero as t gets large and the epithelium gets large. This implies that the average number of neighbours per cell will approach six from below. In fact, the convergence rate is exponential since f t ~

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Cell topology, geometry, and morphogenesis in proliferating epithelia.

Epithelia are sheets of tightly adherent cells that line both internal and external surfaces in a vast array of metazoans. During development, an intrinsic consequence of coupling tight adhesion with cellular proliferation is the emergence of an epithelial form characterized by a stereotyped distribution of polygonal cell shapes. Despite the near universality of this constraint on cell shape an...

متن کامل

وضعیت تغذیه کمکی در کودکان زیر یک سال مراجعه‌کننده به درمانگاه‌های ایلام

Background & Aim: Exclusive breast feeding is highly recommended for children under six months and the best time for starting supplementary food is the end of sixth months. Inadequate feeding can lead to malnutrition. Since infants;apos supplementary feeding pattern is influenced highly by the socio-cultural status it is necessary to study the subject in diverse conditions. This study aimed to ...

متن کامل

Online Streaming Feature Selection Using Geometric Series of the Adjacency Matrix of Features

Feature Selection (FS) is an important pre-processing step in machine learning and data mining. All the traditional feature selection methods assume that the entire feature space is available from the beginning. However, online streaming features (OSF) are an integral part of many real-world applications. In OSF, the number of training examples is fixed while the number of features grows with t...

متن کامل

Modulation of cellular transport characteristics of the human lung alveolar epithelia

Among the drug delivery and targeting (DDT) routes, lung alveolar epithelium has been given enormous attentions in terms of the delivery of a wide range of macromolecules such as gene- or protein-based nanopharmaceuticals. However, little is known about cellular modulation of lung transport characteristics by endogenous and/or exogenous agents. Thus, in the current study, impact of dexamethason...

متن کامل

ارزیابی لاین‌های گندم دوروم با استفاده از شاخص‌های مبتنی بر عملکرد دانه در شرایط خشکی و بررسی ارتباط بین شاخص‌ها با یکدیگر

In order to study tolerance of durum wheat (Triticum durum) lines to drought stress and also evaluating stress tolerance indices, an experiment based on randomized complete block design with four replications was conducted under two rain fed and supplementary irrigation conditions at Gachsaran station during 2011-2012 cropping season using 20 durum wheat lines. Results of combined analysis of v...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2007